Very interesting and important list to keep track of. I‘d like to add some points to „non-living environment“, since this is related to my hobby-horse of the 3D anorganic environment design document. The phase of the microscopic and biological stages will determine many resources for the societal stages and the microscopic phase will already determine these resources for the (3D) biological stages. I‘m thinking of fossile fuels like coal, oil and natural gas, but also of things like chalk which comes from foraminifera exoskeletons and mineral remains of certain algae species of ancient dried up oceans. Also many types of limestone are of biological origins, both microscopic and macroscopic (often made of mussle shells etc). This also has huge impacts on soil fertility. For example the amazon basin is fertilized each year from sahara sand being blown across the atlantic from the foraminifera-exoskeleton-rich Bodélé Depression in Chad.
I‘m surely forgetting some other similar resources, so any other ideas are welcome!